Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002661.1 Hibiscus syriacus cultivar Beakdansim tig00005461_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51337

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
772--809
19
2.0
19
100
0
76
52
21
5
21
1.66
1363--1427
2
32.5
2
93
0
112
47
0
3
49
1.17
23008--23048
3
13.0
3
90
10
64
65
2
0
31
1.05
25382--25408
12
2.2
12
100
0
54
40
0
0
59
0.98
37187--37237
22
2.3
22
79
3
57
70
9
13
5
1.32
41355--41412
24
2.4
24
100
0
116
50
5
12
32
1.62
41367--41410
13
3.5
13
75
12
56
50
2
13
34
1.55
46978--47131
31
5.0
31
96
1
274
38
22
19
19
1.94
47803--47847
21
2.1
21
87
0
63
15
24
28
31
1.96

Tables:   1

The End!