Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002683.1 Hibiscus syriacus cultivar Beakdansim tig00005547_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68812

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9530--9609
26
3.1
26
80
7
99
26
12
26
35
1.92
10281--10459
89
2.0
89
97
2
344
43
5
12
39
1.66
11250--11291
21
2.0
22
90
4
68
45
7
19
28
1.76
20893--20927
6
5.8
6
93
0
52
0
22
65
11
1.24
21888--21929
17
2.5
17
96
0
75
33
11
38
16
1.86
24696--24765
29
2.4
29
90
0
104
22
30
31
15
1.95
25624--25664
21
1.9
22
85
5
57
36
4
21
36
1.75
25800--25865
35
1.9
33
85
11
89
53
7
9
30
1.60
28132--28156
11
2.3
11
100
0
50
92
0
8
0
0.40
30974--31277
149
2.0
149
98
0
590
35
20
16
27
1.94
31759--31909
66
2.3
66
89
4
223
16
25
29
28
1.97
37996--38299
149
2.0
149
98
0
590
35
20
16
27
1.94
38781--38932
67
2.3
67
90
3
234
16
26
28
28
1.97
40856--40894
19
2.1
18
90
4
60
48
5
0
46
1.24
41803--41994
98
2.0
98
88
0
285
38
12
20
28
1.89
48206--48298
29
3.1
29
68
17
73
34
20
5
39
1.75
48187--48303
60
2.0
60
84
1
155
32
21
6
39
1.80
48187--48318
60
2.2
60
82
4
151
31
21
6
39
1.80
54856--54882
3
9.0
3
100
0
54
33
0
0
66
0.92
55690--55737
23
2.0
24
96
4
89
18
12
4
64
1.43
58881--58926
12
3.6
13
81
18
53
13
0
8
78
0.97
58882--58937
27
2.1
27
83
6
69
10
1
7
80
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62819--62997
95
1.9
95
88
2
270
33
19
17
29
1.95
64373--64532
73
2.2
73
84
2
205
32
16
10
40
1.82
64465--64869
65
6.1
65
71
17
287
28
19
11
40
1.87
64374--64659
36
8.2
34
76
13
212
30
17
10
40
1.84
64401--64840
134
3.3
134
91
1
657
28
19
11
40
1.86
64722--64789
33
2.1
32
91
2
109
23
19
13
44
1.85
64758--64887
64
2.0
67
84
4
176
30
20
10
39
1.85
66670--66708
19
2.1
19
85
0
51
7
7
2
82
0.94

Tables:   1

The End!