Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002687.1 Hibiscus syriacus cultivar Beakdansim tig00005551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61170

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2285--4580
860
2.7
843
88
3
3096
37
19
15
28
1.92
6092--6148
22
2.6
22
77
2
62
40
7
0
52
1.28
9357--9404
19
2.5
20
89
3
71
31
12
6
50
1.65
11314--11367
21
2.5
22
75
16
60
31
3
18
46
1.67
12173--12199
2
13.5
2
100
0
54
51
0
0
48
1.00
14267--14296
13
2.2
14
94
5
53
50
0
6
43
1.28
14311--14357
18
2.6
17
81
18
51
53
0
2
44
1.12
14697--14738
16
2.6
16
85
11
50
42
14
9
33
1.78
15891--15918
14
2.0
14
100
0
56
42
0
7
50
1.30
31246--31488
43
5.5
43
74
12
181
25
18
5
50
1.68
31313--31488
43
4.1
43
80
6
185
23
19
5
50
1.69
32221--32277
16
3.5
16
73
2
51
47
3
1
47
1.29
35791--35831
19
2.1
20
86
13
59
51
0
2
46
1.14
35789--35853
22
2.9
22
83
4
67
50
0
1
47
1.10
36129--36177
16
3.2
15
77
11
55
59
0
0
40
0.98
36186--36225
14
2.7
15
84
7
55
52
0
7
40
1.30
41197--41421
110
2.0
110
94
0
396
37
8
32
22
1.83
48386--48469
44
1.9
44
90
0
132
27
32
3
36
1.74
51407--51441
3
11.7
3
87
0
52
62
0
34
2
1.10
57667--57715
24
2.1
24
96
3
91
34
8
30
26
1.86

Tables:   1

The End!