Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000269.1 Hibiscus syriacus cultivar Beakdansim tig00000495_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52443

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6030--6071
21
2.0
21
100
0
84
28
28
14
28
1.95
12981--13017
18
2.1
18
100
0
74
27
29
16
27
1.97
21660--21758
51
1.9
51
93
0
171
19
15
32
33
1.92
23821--23858
17
2.2
17
90
0
58
34
10
39
15
1.82
23830--23870
17
2.4
17
87
0
55
39
9
41
9
1.71
24536--24589
27
2.0
27
100
0
108
29
33
7
29
1.85
30913--30961
24
2.1
22
88
7
71
14
36
22
26
1.92
32966--33054
38
2.4
38
90
7
146
12
11
39
37
1.79
33601--33646
18
2.7
18
86
6
69
28
30
6
34
1.82
34448--34507
23
2.6
25
81
7
65
18
11
16
53
1.72
34462--34507
24
2.0
23
86
4
65
19
10
17
52
1.74
36482--36544
32
2.0
32
84
6
83
14
33
22
30
1.93
38819--38881
24
2.6
24
87
0
81
20
12
15
50
1.77
41888--41931
19
2.3
19
84
4
52
36
2
0
61
1.09
41892--41934
17
2.5
17
82
17
54
34
2
0
62
1.08
41963--42076
59
1.9
59
85
7
160
35
15
3
45
1.64

Tables:   1

The End!