Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002691.1 Hibiscus syriacus cultivar Beakdansim tig00005556_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68839

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7661--7751
46
2.0
47
89
6
141
42
0
3
53
1.17
13221--13245
2
12.5
2
100
0
50
52
0
0
48
1.00
20609--20635
13
2.1
13
100
0
54
37
14
25
22
1.93
22405--22679
116
2.4
114
79
9
270
55
6
10
27
1.58
26648--26673
2
13.0
2
100
0
52
50
0
0
50
1.00
27777--27858
24
3.4
24
75
9
69
51
18
12
18
1.76
27794--27871
24
3.3
23
80
10
86
48
17
14
19
1.81
31503--31539
2
18.5
2
94
0
65
48
0
2
48
1.15
33179--33209
15
2.1
15
93
0
53
45
12
16
25
1.83
33014--33516
252
2.0
248
95
2
900
40
15
11
32
1.83
40500--40544
23
2.0
23
81
0
54
55
6
6
31
1.52
41553--41716
60
2.7
60
77
1
159
44
3
20
31
1.69
42499--42555
2
29.5
2
92
7
100
49
0
0
50
1.00
51701--51780
2
42.0
2
82
9
87
45
0
2
52
1.14
53418--53498
2
41.0
2
97
2
155
50
0
0
49
1.00
57947--58075
60
2.1
60
81
4
143
40
6
13
39
1.71
58747--58804
29
2.0
29
82
0
71
13
32
27
25
1.94
58855--58907
23
2.3
23
83
9
81
30
24
33
11
1.90
58925--58980
29
1.9
29
88
0
85
21
30
33
14
1.93
59039--59126
29
3.0
29
96
0
158
22
29
32
14
1.94
65520--65553
17
1.9
17
88
5
50
32
0
8
58
1.29
68632--68699
22
3.1
22
73
26
72
39
14
14
30
1.87

Tables:   1

The End!