Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002692.1 Hibiscus syriacus cultivar Beakdansim tig00005559_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49315

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--89
31
2.9
31
98
0
169
21
10
21
47
1.80
3384--3424
18
2.3
18
86
0
55
26
17
0
56
1.41
3660--3701
22
1.9
22
95
0
75
26
21
23
28
1.99
4034--4595
275
2.0
275
98
0
1079
36
23
8
31
1.85
6309--6547
55
4.4
55
90
1
365
31
11
20
36
1.88
15914--15980
3
23.0
3
79
11
77
67
1
2
28
1.14
15914--15982
35
2.0
35
91
5
113
65
2
4
27
1.26
16156--16303
43
3.4
43
75
9
136
22
18
31
27
1.97
30985--31048
3
22.0
3
78
12
71
67
1
3
28
1.15
30987--31050
32
2.0
32
90
6
103
65
3
4
26
1.27
32182--32535
55
6.4
55
93
0
575
35
11
18
35
1.86
41108--41159
13
4.0
13
87
0
68
25
17
21
36
1.94
46528--46623
48
2.0
47
93
2
165
39
9
11
39
1.74
47696--47758
24
2.5
26
78
16
71
34
0
1
63
1.04

Tables:   1

The End!