Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002695.1 Hibiscus syriacus cultivar Beakdansim tig00005567_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57083

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1290--1372
29
2.9
29
94
0
139
32
14
10
42
1.80
5985--6095
29
3.8
28
90
5
159
30
17
14
37
1.89
11377--11489
20
5.7
20
89
2
156
45
24
15
14
1.84
11478--11549
20
3.6
20
78
0
90
43
16
16
23
1.88
11459--11554
40
2.4
40
85
0
147
44
17
14
22
1.85
11840--11948
20
5.4
20
79
4
82
43
18
18
20
1.89
11853--11948
40
2.4
40
89
0
147
42
17
17
21
1.89
12108--12153
20
2.3
20
92
0
74
19
21
17
41
1.90
12615--12678
29
2.2
28
78
10
67
45
12
20
21
1.84
12763--12842
13
5.8
15
66
20
50
51
0
0
48
1.00
16219--16284
17
3.6
19
74
15
68
40
0
0
59
0.98
16214--16274
18
3.3
19
79
9
56
42
0
0
57
0.98
16530--16578
22
2.2
22
88
0
71
10
8
28
53
1.63
16507--16553
16
2.9
16
77
0
58
17
4
29
48
1.65
17397--17470
20
3.7
20
80
10
80
32
17
21
28
1.96
18295--18373
22
3.6
22
91
0
131
27
30
26
15
1.96
24492--24576
44
1.9
44
88
4
127
24
25
23
25
2.00
27000--27055
26
2.2
25
78
9
60
53
5
5
35
1.47
27360--27392
17
1.9
17
100
0
66
9
24
0
66
1.20
42122--42152
14
2.2
14
94
0
53
51
22
0
25
1.48
44164--44314
20
7.6
20
69
15
82
33
25
15
25
1.95
45201--45259
24
2.5
24
91
0
91
27
18
16
37
1.93

Tables:   1

The End!