Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002704.1 Hibiscus syriacus cultivar Beakdansim tig00005581_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63929

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7597--7643
20
2.3
20
96
0
85
53
8
14
23
1.69
15772--15814
18
2.2
21
88
12
65
41
16
13
27
1.86
15875--15899
13
1.9
13
100
0
50
60
8
0
32
1.26
19479--19565
23
3.8
23
84
3
104
33
25
21
19
1.97
19903--19945
22
2.0
21
86
4
59
39
18
11
30
1.86
25461--25517
27
2.2
25
90
6
87
50
0
1
47
1.11
27200--27246
2
23.5
2
100
0
94
48
0
0
51
1.00
32450--32498
23
2.1
23
85
7
64
53
8
22
16
1.69
33064--33127
23
2.6
25
82
9
69
54
1
3
40
1.25
39957--40018
23
2.7
23
97
0
115
30
11
14
43
1.80
49907--49958
20
2.7
20
87
3
79
48
0
9
42
1.36
52841--52939
51
1.9
51
91
0
162
40
7
12
40
1.70
57976--58014
20
2.0
20
85
10
53
64
0
2
33
1.08
60161--60191
16
2.0
16
93
6
55
41
6
25
25
1.79
61563--61641
14
5.5
15
79
11
94
37
7
18
35
1.80
61624--61693
20
3.5
20
96
0
131
40
10
14
35
1.79
61870--61926
25
2.2
25
81
12
71
56
1
0
42
1.10
61919--61996
18
4.7
18
71
10
60
46
1
0
52
1.08
61943--62003
31
2.0
31
83
0
77
49
0
0
50
1.00
61894--62007
51
2.3
50
82
8
144
48
0
0
50
1.06
61973--62019
18
2.7
17
83
6
58
48
0
0
51
1.00
62195--62313
41
2.9
42
96
2
222
43
19
21
15
1.88

Tables:   1

The End!