Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002706.1 Hibiscus syriacus cultivar Beakdansim tig00005583_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72628

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21770--21857
29
2.9
31
81
11
94
20
9
29
40
1.83
21831--21950
39
3.5
32
80
17
134
12
10
36
40
1.77
28766--28793
12
2.3
12
100
0
56
14
0
7
78
0.95
29154--29224
36
2.0
36
94
0
124
23
12
9
53
1.68
32671--32706
3
12.0
3
100
0
72
33
0
0
66
0.92
34493--34517
12
2.1
12
100
0
50
20
16
24
40
1.91
41767--41818
15
3.5
15
83
0
59
9
63
15
11
1.52
49565--49604
9
4.4
9
83
0
53
27
0
47
25
1.52
56484--56561
39
2.0
39
97
2
149
47
16
17
17
1.83
64042--64074
2
16.5
2
100
0
66
48
0
0
51
1.00
71473--71611
29
4.9
29
73
11
110
25
7
23
43
1.79
71561--71632
29
2.5
29
86
0
90
31
5
19
43
1.74
71555--71652
29
3.4
29
79
0
79
30
5
22
41
1.75

Tables:   1

The End!