Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000271.1 Hibiscus syriacus cultivar Beakdansim tig00000499_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42089

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3918--3964
24
1.9
25
86
4
69
21
8
4
65
1.37
6840--6891
20
2.5
21
87
3
70
21
34
17
26
1.95
8964--8988
10
2.5
10
100
0
50
16
0
0
84
0.63
9423--9470
21
2.5
18
75
18
51
35
8
6
50
1.58
9691--9761
20
3.4
19
78
17
70
22
33
21
22
1.97
14722--14766
21
2.1
21
84
8
56
24
15
0
60
1.36
14735--14776
21
2.0
21
81
9
50
30
11
0
57
1.35
23682--23820
21
6.7
21
71
5
77
37
24
17
20
1.94
23785--23839
21
2.7
20
88
2
74
45
25
18
10
1.82
23807--23980
20
8.6
20
83
5
217
34
26
19
19
1.96
23807--23980
60
2.9
60
85
0
249
34
26
19
19
1.96
24362--24432
33
2.2
33
84
0
88
12
22
15
49
1.78
24512--24584
21
3.5
21
79
3
94
45
17
24
12
1.83
24505--24621
41
3.1
38
80
14
145
46
17
25
11
1.81
24575--24628
14
3.5
14
73
22
54
42
24
25
7
1.80
24565--24633
33
2.1
33
97
0
129
47
20
24
7
1.75
24639--24722
19
4.7
19
80
14
97
10
23
22
42
1.85
24680--24736
14
3.7
14
79
20
69
8
26
24
40
1.84
24661--24744
33
2.5
33
92
0
150
9
25
21
44
1.82
26437--26908
93
5.1
93
98
1
912
22
12
19
46
1.83
26437--26908
184
2.5
186
97
1
912
22
12
19
46
1.83
26951--27079
19
7.3
19
75
17
125
45
28
17
8
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26987--27079
33
2.8
32
91
4
150
46
27
18
7
1.76
26951--27079
52
2.5
52
74
14
140
45
28
17
8
1.77
27075--27209
19
7.6
19
75
16
128
11
19
23
45
1.82
27097--27153
14
3.7
14
77
20
60
10
21
22
45
1.82
27080--27172
33
2.8
33
95
0
168
10
20
21
47
1.80
29129--29164
14
2.6
14
95
0
63
33
0
22
44
1.53
29270--29369
19
5.5
19
84
12
147
45
17
23
15
1.85
29270--29386
53
2.2
53
95
1
209
43
17
24
14
1.86
29376--29524
19
8.6
19
75
21
148
15
22
18
44
1.86
29376--29492
52
2.2
52
93
0
198
16
20
17
45
1.86
29433--29524
33
2.8
33
96
1
166
13
22
18
45
1.84
29452--29506
14
3.6
14
76
21
56
10
21
20
47
1.80
29583--29679
19
5.4
19
83
14
134
45
17
22
14
1.85
29583--29698
53
2.2
53
96
3
218
43
18
24
13
1.86
32180--32226
24
2.0
24
87
8
69
38
21
14
25
1.92
32908--33137
20
11.6
20
84
5
252
19
19
25
36
1.95
34809--34889
30
2.7
30
96
0
144
20
13
13
51
1.75
41232--41265
6
5.5
6
89
6
50
61
0
38
0
0.96
41749--41795
16
2.9
16
87
3
58
19
19
27
34
1.96

Tables:   1

The End!