Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002710.1 Hibiscus syriacus cultivar Beakdansim tig00005593_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84651

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17529--17560
2
16.0
2
100
0
64
50
0
0
50
1.00
19534--19593
30
2.0
30
96
0
111
28
21
6
43
1.78
23863--24640
137
5.6
137
83
5
943
23
21
23
31
1.98
24295--24582
148
2.0
147
85
2
364
25
22
22
29
1.99
24720--24778
29
2.0
29
96
0
109
49
6
8
35
1.60
27184--27314
60
2.2
61
88
4
194
21
38
25
14
1.91
33472--33514
20
2.2
20
86
0
59
32
13
18
34
1.90
35049--35089
22
2.0
22
90
9
68
31
29
2
36
1.71
39995--40091
44
2.1
48
88
7
148
27
11
20
40
1.87
49746--49873
8
14.4
8
69
21
53
74
0
18
6
1.08
49742--49867
17
7.0
17
68
22
62
74
0
19
5
1.06
49789--49839
11
4.5
11
79
11
50
80
1
15
1
0.89
49789--49861
24
3.1
22
77
12
65
79
1
15
4
0.95
49789--49853
25
2.6
24
85
7
85
80
1
15
3
0.92
49789--49861
26
2.9
25
75
16
71
79
1
15
4
0.95
49800--49872
14
5.3
14
74
9
53
79
0
15
5
0.90
50998--51613
51
12.0
51
97
0
1124
29
15
27
28
1.96
51014--51720
51
13.6
56
93
2
354
29
15
26
28
1.96
51525--51750
55
4.1
54
78
8
183
29
15
22
31
1.95
65842--65898
19
3.0
19
89
0
87
38
26
3
31
1.73
69495--69539
18
2.5
18
92
0
72
51
15
24
8
1.72
70296--70329
17
2.0
17
94
0
59
29
20
29
20
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74138--74176
12
3.1
13
81
7
53
30
7
7
53
1.57
80109--80146
19
2.0
19
94
0
67
36
28
5
28
1.79
81495--81533
15
2.6
15
87
0
51
61
2
0
35
1.10
81666--81710
24
1.9
24
86
4
65
44
2
6
46
1.42
82971--83007
19
1.9
19
100
0
74
48
21
5
24
1.71

Tables:   1

The End!