Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002711.1 Hibiscus syriacus cultivar Beakdansim tig00005594_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66285

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
431--472
21
2.0
22
86
13
61
38
4
4
52
1.44
1145--1206
31
2.0
32
84
9
83
62
1
1
33
1.14
2379--2408
10
3.0
10
90
0
51
30
36
0
33
1.58
2446--2480
17
2.0
18
94
5
63
28
0
8
62
1.24
2457--2513
21
2.7
20
81
13
60
33
0
3
63
1.12
4661--4858
105
1.9
104
81
9
244
15
19
22
42
1.89
7137--7206
29
2.4
29
76
4
70
42
7
21
28
1.79
9004--9098
24
4.0
24
87
1
129
31
23
23
22
1.98
13493--13536
12
3.6
12
81
3
52
52
0
18
29
1.46
18369--18395
2
13.5
2
100
0
54
0
48
0
51
1.00
19187--19218
14
2.3
14
94
0
55
34
6
9
50
1.60
19380--19437
30
2.0
27
83
9
71
41
1
1
55
1.20
19422--19490
21
3.3
21
69
23
56
46
0
1
52
1.09
19610--19652
22
2.0
22
86
9
61
46
6
0
46
1.30
19665--19717
16
3.1
16
73
21
54
47
0
1
50
1.12
19668--19734
20
3.3
20
72
12
64
47
1
1
49
1.19
19808--19862
14
3.9
14
81
11
60
52
1
1
43
1.22
19838--19900
20
3.1
20
77
11
65
46
0
1
52
1.10
20861--20945
44
2.0
44
86
6
122
29
9
2
58
1.42
39313--39360
6
8.0
6
83
0
60
33
4
47
14
1.63
57525--57580
25
2.2
25
81
12
60
48
0
1
50
1.11
57463--57787
159
2.0
159
94
2
573
44
7
5
42
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57516--57842
159
2.1
157
86
6
446
47
6
6
40
1.54
59428--59471
3
14.3
3
80
4
52
56
0
0
43
0.99
59413--59480
28
2.5
27
84
13
86
51
0
0
48
1.00
59434--59479
22
2.1
22
88
8
67
52
0
0
47
1.00
59595--60153
76
7.5
76
91
5
897
34
22
20
23
1.97
59595--60153
148
3.7
153
91
5
908
34
22
20
23
1.97
60179--60463
152
1.9
150
83
5
376
37
12
12
37
1.82
61371--61528
54
3.0
54
80
9
184
25
20
15
38
1.92
65770--65884
8
14.5
8
75
12
87
3
17
0
79
0.87
65771--65795
10
2.5
10
100
0
50
8
8
0
84
0.79
65782--65881
46
2.2
46
85
5
130
3
18
0
79
0.87
65798--65901
46
2.2
46
83
8
122
2
16
2
77
1.00
65782--65884
7
13.4
7
78
15
98
2
17
0
79
0.85

Tables:   1

The End!