Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002713.1 Hibiscus syriacus cultivar Beakdansim tig00005599_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63443

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21158--21373
108
2.0
108
99
0
423
39
14
13
32
1.85
24500--24524
11
2.3
11
100
0
50
8
0
0
92
0.40
25157--25202
19
2.4
19
96
0
83
10
13
10
65
1.48
28595--29221
84
7.5
84
84
2
823
29
25
21
24
1.99
28596--29252
249
2.6
249
90
1
1021
28
25
21
24
1.99
29889--30180
38
7.9
37
75
11
208
45
3
5
45
1.43
29911--30180
73
3.7
73
77
10
230
45
3
5
46
1.42
30068--30130
29
2.1
31
85
5
85
49
3
1
46
1.27
29977--30197
111
2.0
111
81
11
265
44
4
4
46
1.44
30356--30394
10
3.9
10
82
0
51
84
2
5
7
0.84
31437--31474
20
1.9
19
89
5
58
76
10
0
13
1.02
31498--31554
11
5.1
11
71
2
51
78
1
3
15
0.96
32910--32978
35
1.9
37
88
5
106
43
4
5
46
1.47
32904--33200
37
8.1
35
74
13
185
45
5
4
45
1.44
32965--33026
29
2.1
30
85
8
83
46
1
3
48
1.28
32927--33201
111
2.5
109
80
12
296
45
5
4
45
1.45
34077--34119
20
2.1
20
83
12
52
39
9
0
51
1.34
58183--58224
19
2.2
19
91
0
66
16
30
11
40
1.85
58249--58306
30
1.9
30
82
6
73
22
24
25
27
2.00

Tables:   1

The End!