Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002715.1 Hibiscus syriacus cultivar Beakdansim tig00005603_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  147626

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1559--1705
68
2.2
68
98
0
285
38
25
12
23
1.90
4755--4802
24
2.0
24
84
8
62
52
4
0
43
1.20
9290--9318
13
2.2
13
100
0
58
6
6
37
48
1.57
14984--15022
4
9.8
4
82
0
51
43
23
7
25
1.80
14987--15022
8
4.5
8
96
0
63
41
25
8
25
1.83
44767--44837
34
2.2
32
92
5
115
32
16
30
19
1.95
45368--45854
265
1.8
265
84
5
662
35
16
9
39
1.81
48984--49029
23
2.0
23
82
0
56
50
19
13
17
1.78
52149--52191
7
5.8
8
89
8
56
55
0
0
44
0.99
57826--57874
23
2.2
21
76
13
53
14
28
36
20
1.92
58166--58225
30
2.0
30
100
0
120
33
16
10
40
1.82
60108--60151
22
2.0
22
91
8
72
36
4
4
54
1.41
64412--64454
21
2.0
22
86
13
63
34
11
4
48
1.60
74691--74715
2
12.5
2
100
0
50
48
0
0
52
1.00
85077--85101
7
3.6
7
100
0
50
36
0
16
48
1.46
87497--87528
14
2.3
14
94
0
55
34
6
12
46
1.67
93409--93447
2
20.5
2
89
10
64
51
0
0
48
1.00
94116--94159
21
2.2
20
83
4
52
65
11
2
20
1.35
94867--94904
19
2.0
19
89
0
58
42
7
13
36
1.73
96053--96103
21
2.4
21
83
0
66
39
1
1
56
1.22
100350--100401
27
2.0
27
96
3
97
19
17
9
53
1.70
102392--102461
35
2.0
35
97
0
131
21
21
11
45
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109526--109557
16
2.1
16
94
5
57
62
0
0
37
0.95
111974--112009
17
2.1
18
94
5
65
30
30
22
16
1.96
113636--113666
15
2.1
15
93
0
53
45
0
0
54
0.99
113834--113891
20
2.9
20
81
0
80
22
25
10
41
1.85
114520--114561
17
2.5
16
84
7
57
45
2
0
52
1.13
120016--120065
23
2.2
23
85
0
64
56
14
18
12
1.68
122436--122483
2
25.0
2
85
8
64
54
0
0
45
0.99
122394--122483
14
6.5
14
72
15
62
53
2
0
44
1.13
122385--122482
31
3.0
32
83
8
119
54
2
0
43
1.12
130074--130107
17
1.9
18
88
5
52
50
26
2
20
1.63
134387--134440
15
3.7
15
73
26
53
44
3
9
42
1.54
134838--134863
2
13.0
2
100
0
52
50
0
0
50
1.00
135209--135250
19
2.2
19
91
0
66
42
21
0
35
1.53
139129--139204
36
2.1
36
85
7
100
47
1
3
47
1.29
142626--142663
20
1.9
20
88
0
58
18
23
18
39
1.92

Tables:   1

The End!