Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002717.1 Hibiscus syriacus cultivar Beakdansim tig00005607_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72156

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2510--2599
24
3.8
24
71
11
69
28
14
10
46
1.77
2831--2915
41
2.1
40
84
2
107
32
20
18
28
1.96
3033--3066
12
2.8
12
86
0
50
41
14
11
32
1.82
17972--18059
6
14.7
6
90
0
122
47
17
4
30
1.67
19945--19988
23
1.9
23
90
0
70
52
0
4
43
1.22
22545--22569
13
1.9
13
100
0
50
0
16
0
84
0.63
29873--29908
18
2.0
18
88
0
54
52
5
0
41
1.24
44418--44513
48
2.0
47
91
2
156
46
3
5
44
1.41
45149--45178
2
15.0
2
100
0
60
50
0
0
50
1.00
46078--46111
17
2.0
17
94
0
59
26
11
32
29
1.92
52599--52644
21
2.2
21
88
7
67
65
0
0
34
0.93
59269--59351
26
3.2
26
61
16
64
37
9
20
32
1.85
59258--59368
51
2.2
51
98
1
213
35
11
18
35
1.87
60594--60882
22
13.2
22
91
0
472
38
0
11
49
1.39
62353--62467
22
5.2
22
85
5
160
43
0
10
46
1.38
62489--62549
31
2.0
31
93
0
104
45
8
4
40
1.55
68719--69084
183
2.0
182
95
0
660
31
18
18
32
1.95
70064--70117
2
27.0
2
100
0
108
50
0
0
50
1.00
71659--71701
15
2.8
15
82
3
59
13
32
27
25
1.94
71740--71792
16
3.3
16
79
12
56
16
28
33
20
1.95

Tables:   1

The End!