Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002725.1 Hibiscus syriacus cultivar Beakdansim tig00005622_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57351

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7872--7936
27
2.4
27
100
0
130
26
20
21
32
1.97
35726--35762
13
2.8
13
91
0
65
18
48
21
10
1.78
35780--35856
29
2.7
29
87
0
100
23
9
24
42
1.83
43094--43130
13
2.8
13
95
0
65
16
43
29
10
1.82
43177--43250
29
2.5
28
79
12
78
27
5
25
41
1.77
44790--44825
11
3.3
11
96
0
63
61
0
2
36
1.11
47207--47248
21
2.0
22
86
13
61
42
0
2
54
1.13
50322--50391
35
2.0
35
97
0
131
21
8
15
54
1.68
52057--52178
21
6.1
21
68
12
69
23
54
5
15
1.62
52066--52199
39
3.4
39
85
0
178
24
52
6
15
1.66
53170--53224
20
2.8
20
91
0
92
29
32
7
30
1.84
54068--54101
12
2.8
12
90
0
50
55
29
0
14
1.40
54222--54268
24
2.0
24
95
0
85
27
21
17
34
1.95
54455--54481
14
1.9
14
100
0
54
70
0
29
0
0.88
56403--56443
18
2.3
18
91
0
64
53
26
2
17
1.56
56869--56920
25
2.1
25
96
0
95
28
7
21
42
1.80
57293--57339
24
2.0
24
91
0
76
34
4
12
48
1.61

Tables:   1

The End!