Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002729.1 Hibiscus syriacus cultivar Beakdansim tig00005626_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69017

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6205--6244
20
2.1
20
86
9
57
45
10
10
35
1.71
18731--19023
146
2.0
147
91
2
473
39
3
14
43
1.61
24749--24787
20
2.0
20
89
0
60
33
23
10
33
1.88
32758--32795
20
1.9
20
88
0
58
28
23
10
36
1.88
41016--41076
30
2.0
30
93
0
104
26
19
22
31
1.98
41833--41881
25
2.0
24
81
14
57
63
4
0
32
1.13
44049--44090
21
2.0
21
100
0
84
38
14
14
33
1.86
51371--51501
59
2.2
59
81
8
149
48
5
15
31
1.67
54365--54446
21
4.0
21
74
15
80
45
28
0
26
1.54
54726--54766
14
3.1
14
76
20
52
41
0
4
53
1.22

Tables:   1

The End!