Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002730.1 Hibiscus syriacus cultivar Beakdansim tig00005627_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72040

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--555
264
2.0
263
92
6
911
30
8
23
36
1.85
871--911
21
1.9
22
90
5
66
29
24
19
26
1.98
4418--4491
29
2.5
30
95
4
132
51
16
12
20
1.76
14699--15266
54
10.5
54
88
2
795
26
17
20
35
1.95
20213--20479
54
4.9
54
88
3
403
25
16
20
36
1.94
28663--28701
21
1.9
20
84
5
51
35
20
15
28
1.93
29630--29705
24
3.3
24
66
23
72
31
22
9
36
1.86
29632--29719
45
2.0
45
93
0
149
31
23
9
35
1.86
48815--48858
6
7.2
6
81
2
52
77
2
4
15
1.04
50984--51026
19
2.3
19
92
4
70
13
9
0
76
1.01
56428--56467
12
3.6
12
80
12
50
45
2
0
52
1.14
56454--56951
22
22.6
22
89
1
755
37
0
11
50
1.39
56975--57033
31
1.9
31
89
0
91
42
10
5
42
1.60

Tables:   1

The End!