Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002733.1 Hibiscus syriacus cultivar Beakdansim tig00005637_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82851

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2530--2616
2
43.5
2
90
0
138
0
0
44
55
0.99
11492--11563
29
2.5
28
82
8
90
31
22
15
30
1.94
14301--14352
24
2.2
24
92
0
86
46
5
13
34
1.67
14357--14389
10
3.3
10
84
16
50
69
3
6
21
1.24
25633--25682
24
2.1
24
85
7
66
60
12
2
26
1.43
35903--35952
24
2.1
24
85
7
66
60
12
2
26
1.43
44384--44423
12
3.5
12
81
18
50
20
5
0
75
0.99
48251--48400
69
2.2
69
92
0
246
34
13
32
20
1.91
49265--49303
17
2.4
17
87
12
55
53
0
2
43
1.14
51319--51360
9
4.9
9
77
11
52
45
0
26
28
1.54
51305--51362
25
2.3
25
100
0
116
44
0
25
29
1.54
52109--52175
21
3.2
21
82
0
71
32
13
14
38
1.86
57457--57610
69
2.2
68
89
4
236
31
14
31
21
1.94
62157--62196
21
1.9
21
85
10
55
40
7
2
50
1.44
63349--63405
27
2.1
27
96
0
105
28
5
12
54
1.59
65452--65503
20
2.6
20
100
0
104
15
44
25
15
1.85
71277--71328
22
2.5
22
81
6
63
25
36
21
17
1.94
74485--74661
88
2.0
89
94
1
311
35
7
21
35
1.83
75887--75936
17
3.1
17
68
26
54
52
22
6
20
1.68
76464--76495
2
16.5
2
93
6
57
50
0
0
50
1.00

Tables:   1

The End!