Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002737.1 Hibiscus syriacus cultivar Beakdansim tig00005642_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55817

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4662--4703
2
21.0
2
100
0
84
50
0
0
50
1.00
8456--8498
20
2.2
20
83
8
52
69
13
0
16
1.19
8762--8799
2
20.5
2
84
15
55
50
0
0
50
1.00
9407--9469
23
2.9
22
76
6
58
39
14
19
26
1.90
17744--17777
17
2.0
16
88
11
50
20
2
11
64
1.39
22433--22464
15
2.1
15
94
0
55
62
9
18
9
1.52
28821--28850
2
15.0
2
100
0
60
50
0
0
50
1.00
30084--30108
13
1.9
13
100
0
50
48
4
8
40
1.51
30770--30798
12
2.4
12
100
0
58
0
34
31
34
1.58
32379--32439
20
2.9
21
87
9
88
21
24
32
21
1.98
36246--36285
21
1.9
21
89
0
62
42
7
0
50
1.30
42130--42197
14
4.7
14
70
5
55
29
25
20
25
1.99
42200--42226
14
1.9
14
100
0
54
18
22
22
37
1.95
47252--47304
27
2.0
27
85
7
72
45
18
11
24
1.82

Tables:   1

The End!