Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002740.1 Hibiscus syriacus cultivar Beakdansim tig00005650_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58431

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
952--1084
39
3.3
39
72
15
126
57
9
2
30
1.44
926--1087
82
2.0
82
91
0
261
56
9
1
32
1.42
5880--5910
16
1.9
16
93
0
53
29
29
22
19
1.98
11900--11949
26
1.9
26
84
8
66
34
4
26
36
1.75
16158--16276
57
2.1
58
95
1
213
33
14
7
44
1.73
17809--17856
25
1.9
25
86
0
69
27
10
10
52
1.68
21010--21049
12
3.2
12
93
6
71
15
55
15
15
1.71
21003--21049
13
3.6
13
91
8
78
17
53
17
12
1.73
24310--24341
15
2.1
16
94
5
57
6
25
18
50
1.70
47004--47077
31
2.4
30
80
8
85
29
2
18
48
1.62
48856--48893
18
2.1
18
85
9
51
55
2
0
42
1.14
50779--50837
23
2.6
23
86
0
91
30
27
25
16
1.97
53895--54094
107
1.9
107
89
0
310
27
19
17
36
1.93
54178--54267
20
4.5
20
90
0
126
33
21
17
27
1.96

Tables:   1

The End!