Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002742.1 Hibiscus syriacus cultivar Beakdansim tig00005652_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59701

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
792--858
35
1.9
35
96
0
125
20
7
16
55
1.65
2485--2587
39
2.6
39
87
0
152
22
55
5
16
1.62
2463--2576
18
5.7
21
68
13
60
23
55
6
14
1.62
2463--2585
21
6.1
21
68
12
78
23
55
5
15
1.62
3548--3602
20
2.8
20
100
0
110
25
34
9
30
1.87
4576--4622
24
2.0
24
95
0
85
27
21
17
34
1.95
6701--6736
18
2.0
18
94
0
63
55
25
2
16
1.55
7020--7070
20
2.5
20
87
0
75
43
21
19
15
1.88
7169--7218
14
3.8
13
72
17
50
26
8
22
44
1.80
7168--7217
25
2.0
25
92
0
82
28
8
20
44
1.79
7602--7648
18
2.6
18
79
0
58
36
6
8
48
1.59
7594--7646
24
2.2
24
89
0
79
33
5
13
47
1.66
7603--7654
24
2.2
24
82
0
59
34
9
9
46
1.69
9265--9359
21
4.6
21
78
11
106
23
15
36
24
1.94
9265--9359
41
2.3
42
78
12
106
23
15
36
24
1.94
11492--11542
20
2.5
20
80
0
66
52
19
11
15
1.73
11845--11892
22
2.2
22
92
0
78
22
14
41
20
1.89
12022--12166
20
7.3
19
72
18
109
20
17
21
40
1.92
12022--12166
60
2.4
60
92
0
236
20
17
21
40
1.92
12192--12262
20
3.6
19
74
12
72
25
15
30
28
1.96
14655--14728
12
6.2
12
73
17
57
51
1
0
47
1.09
14637--14694
23
2.4
23
82
5
71
50
1
0
48
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14683--14715
3
11.7
3
87
12
52
63
0
0
36
0.95
14900--14946
21
2.1
24
84
11
64
42
0
0
57
0.98
19584--19609
2
13.0
2
100
0
52
50
0
0
50
1.00
22564--22675
47
2.5
46
88
5
158
41
8
17
32
1.81
28069--28158
10
9.3
9
75
13
72
16
26
26
30
1.97
28070--28167
19
5.1
19
77
14
69
15
27
26
30
1.96
28068--28142
29
2.5
30
89
8
118
17
26
26
29
1.97
28163--28218
17
3.3
17
94
0
103
17
44
23
14
1.85
35442--35480
17
2.3
17
100
0
78
17
46
23
12
1.83
41513--41558
16
2.8
16
86
6
56
73
2
2
21
1.04
42147--42325
66
2.7
68
83
5
220
56
13
1
28
1.44
44108--44177
29
2.4
29
81
15
83
18
7
11
62
1.50
44125--44188
29
2.2
29
86
8
85
20
9
10
59
1.58
45416--45458
17
2.5
17
96
0
77
25
4
41
27
1.75
46998--47024
11
2.5
11
100
0
54
85
14
0
0
0.61
50484--50530
24
2.0
24
83
8
60
57
12
2
27
1.47
58362--58438
23
3.2
24
68
27
58
62
2
2
32
1.23

Tables:   1

The End!