Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002745.1 Hibiscus syriacus cultivar Beakdansim tig00005655_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51112

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--160
15
2.2
15
89
10
50
54
0
27
18
1.44
268--344
21
3.7
21
82
0
73
40
7
23
28
1.82
4213--4420
110
1.9
110
86
1
299
35
20
13
30
1.92
8194--8416
79
2.8
79
90
0
347
28
23
10
37
1.88
8531--8599
34
2.0
34
97
0
129
31
7
10
50
1.63
14083--14143
20
2.9
21
85
11
72
19
26
32
21
1.97
21350--21410
27
2.2
27
82
2
77
37
34
3
24
1.72
22677--23013
109
3.0
110
85
4
428
32
10
16
40
1.83
22677--23014
57
6.1
53
73
13
229
32
10
16
40
1.83
22686--23072
112
3.4
112
82
7
331
33
10
16
38
1.84
23333--23558
60
3.8
60
90
4
305
30
30
14
24
1.94
26001--26052
27
2.0
26
88
3
77
46
0
17
36
1.48
28391--28427
16
2.3
16
90
9
58
70
2
0
27
1.01
32537--32579
17
2.6
15
80
20
50
16
27
23
32
1.96
35225--35621
163
2.4
164
94
0
679
21
10
31
36
1.87
38015--38077
33
1.9
33
83
6
83
26
25
14
33
1.94
38606--38658
21
2.5
20
88
8
79
28
15
22
33
1.94
39256--39303
24
2.0
24
100
0
96
45
8
8
37
1.64
46360--46475
57
2.0
58
98
1
225
38
30
12
18
1.87
49654--49687
17
2.0
17
88
0
50
70
8
2
17
1.25

Tables:   1

The End!