Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002747.1 Hibiscus syriacus cultivar Beakdansim tig00005658_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70968

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2468--2501
17
2.0
16
88
11
50
64
11
2
20
1.39
6694--6910
116
1.9
117
82
2
276
48
8
14
27
1.73
10767--10829
23
2.9
22
76
6
58
26
19
14
39
1.90
11437--11474
2
20.5
2
84
15
55
50
0
0
50
1.00
15535--15578
2
21.5
2
95
4
79
50
0
2
47
1.13
25518--26529
504
2.0
503
95
2
1805
33
15
19
31
1.93
28325--28371
24
1.9
25
83
12
62
57
4
12
25
1.54
40616--40664
24
2.0
24
96
0
89
32
18
20
28
1.96
42401--42446
24
1.9
24
90
0
74
8
17
19
54
1.68
63797--63834
20
1.9
20
88
0
58
39
13
15
31
1.86
64622--64657
17
2.1
18
89
5
56
55
5
2
36
1.38
66437--66477
20
2.0
20
100
0
82
19
31
34
14
1.92
67584--68328
106
7.0
106
88
3
995
23
17
23
36
1.95
68625--68651
14
1.9
14
100
0
54
22
18
22
37
1.95
69267--69378
57
1.9
57
82
8
138
13
21
11
53
1.71

Tables:   1

The End!