Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002749.1 Hibiscus syriacus cultivar Beakdansim tig00005665_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68020

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154--212
15
4.1
14
79
16
68
33
1
0
64
1.04
1292--1331
15
2.6
15
88
4
53
12
5
2
80
0.98
1292--1336
16
2.9
15
86
6
54
11
6
2
80
0.99
22826--22855
9
3.3
9
95
0
51
70
0
13
16
1.18
23896--24099
110
1.9
110
91
0
336
35
24
19
20
1.95
25585--25685
12
7.6
13
70
24
61
36
4
0
57
1.27
29608--29925
158
2.0
156
84
7
412
38
31
11
18
1.87
31894--31934
21
1.9
22
90
5
66
26
29
29
14
1.95
31895--31956
32
1.9
33
83
3
81
27
22
32
17
1.97
33767--33851
41
2.0
42
84
2
109
38
16
18
25
1.92
34480--34828
175
2.0
174
96
0
644
29
17
23
29
1.97
36521--36561
21
1.9
22
90
5
66
26
29
29
14
1.95
38401--38485
41
2.0
42
84
2
109
38
16
18
25
1.92
39116--39463
175
2.0
173
96
1
642
29
17
23
29
1.97
41156--41196
21
1.9
22
90
5
66
26
29
29
14
1.95
41157--41218
32
1.9
33
83
3
81
27
22
32
17
1.97
43038--43121
41
2.0
41
84
4
107
39
16
19
25
1.92
43751--44098
175
2.0
173
96
1
642
29
17
23
29
1.97
46898--47076
43
4.2
43
81
0
198
34
16
19
29
1.94
54434--54498
28
2.3
28
91
0
112
20
20
29
30
1.97
62745--62782
20
1.9
20
100
0
76
28
31
15
23
1.96
66698--66753
22
2.6
23
81
16
66
35
16
25
23
1.94

Tables:   1

The End!