Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002750.1 Hibiscus syriacus cultivar Beakdansim tig00005666_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87723

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2173--2209
15
2.5
15
90
0
56
13
21
27
37
1.91
9520--9546
14
1.9
14
100
0
54
37
0
40
22
1.54
13305--13338
16
2.1
17
88
5
52
70
0
14
14
1.17
13975--14021
13
3.5
13
82
5
58
27
4
40
27
1.75
13986--14025
14
2.9
14
88
3
55
32
2
40
25
1.69
18433--18495
26
2.4
26
81
5
65
23
15
17
42
1.88
19334--19396
22
2.7
22
82
7
63
34
25
22
17
1.95
26106--26158
26
2.0
27
82
10
65
64
1
1
32
1.15
26792--26816
2
12.5
2
100
0
50
48
0
0
52
1.00
26915--26998
37
2.2
38
82
2
98
47
4
4
42
1.45
32983--33183
108
1.8
111
87
8
304
37
2
9
49
1.50
33008--33230
108
2.1
109
79
7
240
39
4
7
49
1.50
34151--34213
30
2.1
30
82
11
76
57
1
0
41
1.08
34153--34213
31
2.0
31
83
6
79
55
1
0
42
1.09
35673--35708
17
2.1
17
90
10
56
19
19
0
61
1.35
36968--37003
17
2.1
17
89
0
54
61
5
11
22
1.50
37029--37672
332
1.9
332
94
0
1146
34
8
25
31
1.86
44056--44096
18
2.3
18
100
0
82
29
46
9
14
1.77
52030--52108
2
39.5
2
97
0
149
49
0
1
49
1.09
57934--57967
3
11.7
3
87
6
52
61
2
0
35
1.11
57943--57970
14
2.0
14
100
0
56
64
0
0
35
0.94
64843--64898
27
2.1
27
82
0
67
23
23
16
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71735--71777
22
2.0
22
95
0
77
11
13
25
48
1.77
71817--71851
3
11.7
3
100
0
70
65
0
0
34
0.93
72065--72094
14
2.1
15
93
6
53
63
6
6
23
1.43
72768--72807
6
6.2
6
88
11
53
17
0
0
82
0.67
73221--73285
13
4.9
13
72
10
51
64
1
0
33
1.03
81506--81536
16
1.9
16
93
0
53
51
0
9
38
1.35
82619--82948
176
1.9
175
80
8
391
37
10
10
40
1.76
85815--85857
20
2.2
20
87
4
61
34
9
4
51
1.55
86201--86275
34
2.2
35
85
7
100
26
37
2
33
1.71
86464--86504
15
2.7
15
100
0
82
24
26
0
48
1.51
86413--86517
44
2.4
43
81
10
117
20
24
0
54
1.45
86405--86516
27
3.9
28
73
24
83
20
25
0
54
1.45
86784--86817
11
2.9
11
91
8
50
85
2
8
2
0.80
86775--86820
19
2.3
20
85
3
58
82
2
13
2
0.85

Tables:   1

The End!