Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002753.1 Hibiscus syriacus cultivar Beakdansim tig00005670_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48820

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5488--5513
13
2.0
13
100
0
52
53
7
15
23
1.67
7607--7703
20
4.8
20
78
7
97
20
12
22
44
1.85
7659--7730
27
2.7
27
88
0
108
25
12
20
41
1.87
7607--7751
20
6.8
20
73
13
85
22
12
21
44
1.85
10605--10675
24
3.0
24
91
0
115
35
15
21
28
1.94
10634--10684
24
2.1
24
88
0
75
37
19
17
25
1.94
11600--11682
20
4.2
20
72
6
69
39
12
20
27
1.88
11645--11724
42
2.0
42
87
5
119
37
11
21
30
1.88
11717--11807
20
4.6
19
78
11
94
24
13
27
35
1.92
11654--11807
82
1.9
79
81
9
186
29
12
24
33
1.92
12136--12166
2
15.5
2
100
0
62
48
0
0
51
1.00
12222--12264
21
2.0
21
82
8
52
30
0
4
65
1.13
12255--12309
23
2.4
24
85
11
71
38
3
1
56
1.28
36004--36210
76
2.8
75
83
5
258
30
1
12
55
1.45
36788--36821
17
2.0
17
88
0
50
23
0
2
73
0.97
36877--36939
29
2.2
28
85
2
81
28
1
0
69
0.97
45143--45380
83
2.9
84
82
5
243
32
15
17
34
1.91
45490--45568
39
2.0
39
82
4
97
29
20
18
31
1.97
45555--45678
41
3.0
41
87
0
167
27
18
17
36
1.94

Tables:   1

The End!