Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002758.1 Hibiscus syriacus cultivar Beakdansim tig00005686_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70482

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3200--3260
28
2.1
29
84
6
79
65
1
3
29
1.18
4034--4073
16
2.6
15
88
4
53
50
5
0
45
1.23
6599--6632
11
3.0
11
87
8
50
5
38
2
52
1.41
7456--7504
21
2.4
22
77
16
61
34
20
18
26
1.95
7468--7507
21
2.0
20
90
5
62
35
17
22
25
1.95
12874--12916
22
2.0
21
90
4
68
25
11
23
39
1.88
17544--17951
137
3.0
134
83
4
460
27
13
14
45
1.82
19588--19624
15
2.5
15
86
0
56
13
13
62
10
1.55
27926--28527
270
2.2
269
86
2
832
35
21
16
26
1.94
29332--29374
18
2.4
18
96
0
77
23
6
0
69
1.12
29502--29531
5
5.8
5
92
7
51
16
3
0
80
0.85
29499--29568
36
1.9
36
88
5
106
14
11
1
72
1.18
34859--34927
32
2.2
32
86
0
93
26
24
33
15
1.95
36238--36310
2
36.5
2
100
0
146
50
0
0
49
1.00
37707--37764
20
2.8
21
86
5
73
22
15
22
39
1.91
39807--39844
17
2.1
19
85
9
53
47
7
5
39
1.55
52867--52920
24
2.2
25
83
9
76
14
16
16
51
1.76
52867--52921
12
4.6
12
79
0
56
14
16
16
52
1.75
53067--53140
32
2.3
32
86
2
96
13
21
33
31
1.92
54706--54778
32
2.3
33
78
7
87
30
20
15
34
1.93
62779--62830
21
2.5
21
93
0
86
50
19
7
23
1.73

Tables:   1

The End!