Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000276.1 Hibiscus syriacus cultivar Beakdansim tig00000510_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65030

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3411--3988
287
2.0
287
98
0
1129
27
12
23
35
1.92
17996--18048
16
3.2
16
78
10
54
64
0
33
1
1.05
19266--19306
15
2.5
17
84
11
50
31
2
4
60
1.30
19316--19345
3
10.0
3
100
0
60
33
0
0
66
0.92
20787--21075
142
2.0
142
98
0
560
39
12
6
41
1.70
21487--21552
33
2.0
33
91
5
107
42
3
30
24
1.70
21521--21664
53
2.7
54
82
9
188
36
6
26
29
1.83
23289--23348
29
2.1
29
100
0
120
13
21
26
38
1.90
23471--23554
41
2.1
39
86
8
116
46
25
5
22
1.74
28300--28367
26
2.6
27
95
2
104
50
16
8
25
1.73
30370--30412
16
2.8
16
92
3
70
41
11
18
27
1.85
35184--35255
23
3.0
24
75
13
76
34
1
11
52
1.45
39326--39364
16
2.4
16
95
0
69
51
17
5
25
1.66
40088--40133
16
2.8
17
84
12
60
50
2
6
41
1.40
41316--41344
14
2.1
14
93
6
51
82
6
3
6
0.93
42329--42359
6
5.0
6
92
7
53
19
0
0
80
0.71
42329--42359
13
2.5
12
90
10
53
19
0
0
80
0.71
42329--42370
18
2.3
19
87
4
59
26
0
0
73
0.83
43366--43415
17
2.9
17
82
8
66
80
0
2
18
0.82
43368--43424
16
3.7
15
76
15
55
78
0
1
19
0.83
43366--43415
25
2.0
26
88
11
77
80
0
2
18
0.82
43366--43418
8
6.5
8
79
12
63
81
0
1
16
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43374--43430
18
2.8
19
84
12
62
75
0
5
19
0.99
44391--44433
21
2.0
21
95
0
77
13
25
32
27
1.94
44830--44876
24
1.9
25
82
4
60
55
10
0
34
1.35
44833--44915
40
2.0
41
86
2
114
55
6
0
38
1.25
44908--44983
25
3.0
25
79
14
75
40
7
7
43
1.63
44960--45179
37
6.0
35
76
11
174
43
9
2
44
1.51
44960--45165
38
5.5
37
78
11
199
42
9
2
44
1.52
45807--46420
165
3.7
163
86
2
798
26
20
24
29
1.99
45726--46407
84
8.2
82
79
5
496
26
20
23
29
1.99
45761--46348
249
2.4
247
82
5
702
26
19
24
29
1.98
47503--47750
95
2.6
93
86
6
336
31
18
17
31
1.95
49273--49431
65
2.5
65
83
5
189
31
18
19
30
1.96
49815--49866
22
2.4
22
80
3
70
21
42
0
36
1.53
49988--50024
13
2.8
13
100
0
74
45
16
0
37
1.47
50310--50349
16
2.5
16
100
0
80
37
20
17
25
1.94
52177--52237
23
2.6
23
87
7
88
27
22
26
22
1.99
56050--56090
21
2.0
21
85
9
57
34
12
2
51
1.52
58013--58218
65
3.2
62
79
10
216
29
17
21
31
1.96
61613--61662
15
3.4
15
81
10
59
76
0
2
22
0.89
62994--63055
3
18.7
3
86
6
52
69
3
0
27
1.04
62998--63029
4
8.2
4
93
6
57
75
0
0
25
0.81
62990--63029
11
3.5
11
93
3
62
72
0
0
27
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62994--63055
12
4.6
14
77
16
60
69
3
0
27
1.04
62994--63053
11
4.7
13
80
17
56
70
3
0
26
1.03
63047--63148
37
2.8
35
77
15
100
51
5
0
41
1.32
63044--63155
35
3.1
35
78
17
104
51
5
0
41
1.30
63120--63176
28
2.0
28
83
6
71
43
3
7
45
1.48
63158--63205
25
1.9
25
87
8
71
39
10
6
43
1.64
63267--63335
31
2.3
31
85
5
88
43
10
1
44
1.46
63182--63434
40
6.9
36
73
18
170
44
9
2
44
1.48
63216--63353
70
2.0
69
87
7
199
44
10
1
44
1.46

Tables:   1

The End!