Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002761.1 Hibiscus syriacus cultivar Beakdansim tig00005691_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83453

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15070--15108
18
2.2
17
90
4
60
17
46
23
12
1.83
20580--20644
23
2.8
24
77
17
73
55
4
6
33
1.45
26896--26937
21
2.0
21
85
4
57
7
16
4
71
1.26
26930--26962
12
2.6
13
85
9
50
3
12
6
78
1.04
37239--37286
25
1.9
25
91
0
78
16
50
22
10
1.76
37255--37304
20
2.5
20
90
9
77
20
46
22
12
1.83
39614--39673
24
2.5
24
91
0
93
23
21
20
35
1.96
43058--43117
24
2.5
24
88
0
93
23
16
21
38
1.93
45785--45831
18
2.7
18
83
3
60
44
0
0
55
0.99
45785--45841
8
6.1
10
73
19
52
43
0
1
54
1.10
45792--45845
28
2.0
26
92
7
90
48
0
1
50
1.11
46924--47220
158
1.9
156
79
4
337
30
18
16
34
1.93
51148--51320
29
5.9
29
69
2
105
28
6
21
42
1.78
52242--52618
42
8.9
42
89
3
526
18
23
24
33
1.97
64400--64454
12
4.4
12
73
22
51
49
0
1
49
1.11
65436--65887
82
5.5
82
76
4
313
31
16
16
35
1.91
65572--65868
162
1.8
162
82
2
380
31
14
16
37
1.89
77460--77995
259
2.1
259
94
2
934
43
13
11
32
1.79
82520--82565
24
1.9
24
82
8
58
36
4
0
58
1.18
82412--82886
241
2.0
241
92
4
807
40
5
7
47
1.54

Tables:   1

The End!