Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002767.1 Hibiscus syriacus cultivar Beakdansim tig00005704_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66289

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12732--12759
2
14.0
2
100
0
56
50
0
0
50
1.00
13540--13705
90
1.9
89
94
1
296
38
9
6
45
1.63
14864--14905
20
2.1
20
86
8
59
9
14
2
73
1.18
18692--18753
28
2.2
28
85
0
79
41
29
8
20
1.81
19559--19652
40
2.3
40
81
3
100
25
12
23
38
1.90
19584--19652
20
3.5
20
85
0
102
26
10
26
37
1.88
30139--30173
11
3.2
11
87
0
52
31
20
8
40
1.82
39720--39757
20
2.0
20
89
5
60
42
23
0
34
1.55
49837--49918
22
3.7
22
85
0
110
20
18
24
36
1.95
53534--53661
42
3.0
42
84
5
170
41
21
5
32
1.76
54162--54260
49
2.0
49
100
0
198
28
12
26
33
1.92
59697--59817
32
3.8
32
91
2
181
30
17
12
39
1.86
59698--59831
32
4.2
32
89
1
144
30
17
12
38
1.87
59698--59831
64
2.1
64
84
5
173
30
17
12
38
1.87
61001--61054
21
2.6
21
93
0
90
27
18
12
40
1.87

Tables:   1

The End!