Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000278.1 Hibiscus syriacus cultivar Beakdansim tig00000514_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50081

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74--110
17
2.2
18
90
9
60
27
5
2
64
1.28
2421--2493
22
3.4
22
73
16
62
19
15
8
57
1.62
5029--5085
14
4.1
15
71
26
54
82
3
14
0
0.80
5018--5087
26
2.9
23
82
17
88
81
2
15
0
0.81
5049--5089
16
2.5
17
80
11
59
82
2
14
0
0.76
5041--5065
10
2.5
10
100
0
50
84
0
16
0
0.63
5022--5088
16
4.3
15
76
16
55
80
2
16
0
0.83
9791--9865
21
3.5
22
90
3
118
34
12
13
40
1.81
10542--11485
76
12.4
76
96
0
1717
23
19
22
34
1.96
10542--11485
305
3.1
305
96
0
1746
23
19
22
34
1.96
11624--11673
3
16.7
3
85
8
66
36
0
0
64
0.94
11624--11676
21
2.5
21
87
0
79
37
0
0
62
0.96
17095--17145
25
2.0
25
88
0
75
52
7
7
31
1.59
21571--21631
31
2.0
31
96
0
113
34
14
16
34
1.89
22994--23076
17
4.8
17
74
4
67
46
9
8
34
1.67
22994--23076
35
2.4
36
79
6
98
46
9
8
34
1.67
26016--26044
15
2.0
15
93
6
51
44
0
0
55
0.99
31472--31496
11
2.3
11
100
0
50
44
8
12
36
1.71
31634--32317
112
6.1
112
91
2
1022
46
13
14
25
1.82
31634--32317
223
3.1
223
90
2
1047
46
13
14
25
1.82
32192--32639
181
2.5
177
86
3
594
43
12
16
27
1.84
33502--33534
2
16.5
2
100
0
66
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36713--36780
16
4.2
16
74
7
57
14
14
22
48
1.80
47471--47506
18
2.0
18
100
0
72
27
33
22
16
1.95

Tables:   1

The End!