Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002782.1 Hibiscus syriacus cultivar Beakdansim tig00005736_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73840

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6993--7070
32
2.4
32
89
0
129
23
21
25
29
1.99
7305--7383
31
2.5
31
75
15
90
16
27
30
25
1.97
12467--12536
31
2.3
31
85
5
88
15
30
27
27
1.96
14517--14644
35
3.6
35
73
16
129
24
19
21
35
1.96
19123--19180
30
1.9
30
82
6
73
34
5
15
44
1.69
22555--22584
2
15.0
2
92
0
51
46
0
3
50
1.18
22385--22617
127
1.8
123
83
10
308
39
6
5
48
1.52
27800--27840
21
1.9
22
90
5
66
21
17
19
41
1.90
37156--37228
3
24.3
3
86
5
76
57
0
0
42
0.98
37476--37531
17
3.2
17
68
26
53
17
25
8
48
1.76
37459--38321
113
7.8
112
93
2
1369
32
18
14
34
1.92
40310--40355
16
2.6
17
83
13
58
54
6
8
30
1.56
51302--51331
11
2.7
11
89
0
51
66
3
0
30
1.07
53444--53522
3
26.7
3
84
7
72
58
0
0
41
0.98
60815--60910
43
2.2
44
90
5
149
42
6
18
32
1.75
61094--61158
17
3.6
17
72
22
60
20
24
30
24
1.98
61065--61160
38
2.5
38
93
0
165
25
23
28
22
2.00
61073--61141
21
3.5
21
70
22
67
24
27
26
21
1.99

Tables:   1

The End!