Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002787.1 Hibiscus syriacus cultivar Beakdansim tig00005742_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53687

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
480--548
2
35.5
2
91
5
115
52
0
0
47
1.00
13167--13212
19
2.4
19
100
0
92
36
17
4
41
1.69
15493--15560
28
2.4
28
92
0
118
54
16
10
19
1.70
15878--16217
101
3.4
101
81
6
361
30
16
12
41
1.85
16437--16565
45
2.9
43
81
3
141
29
17
19
33
1.95
16329--16933
208
2.9
208
87
3
826
34
17
20
27
1.95
16746--17047
164
1.9
164
81
8
381
35
18
20
25
1.95
18206--18297
14
6.5
14
66
12
53
20
14
4
60
1.50
24443--24480
6
6.3
6
100
0
76
15
0
47
36
1.46
37756--37801
17
2.6
18
82
10
58
17
8
4
69
1.31
40203--40231
12
2.3
13
94
5
51
75
0
13
10
1.04
40225--40325
34
3.0
34
78
11
93
76
2
14
5
1.10
45293--45317
7
3.6
7
100
0
50
76
0
12
12
1.04
45266--45327
14
4.5
14
69
22
51
75
6
11
6
1.17
47659--48214
134
4.2
134
82
3
645
33
21
16
29
1.94
47685--48232
133
4.1
134
79
6
567
33
20
16
29
1.95
48407--48447
3
13.7
3
92
0
64
26
2
2
68
1.15
52917--53275
171
2.1
173
92
5
606
27
8
15
47
1.75
53258--53297
2
20.5
2
94
5
73
50
0
0
50
1.00
53088--53470
198
1.9
197
93
4
666
28
8
14
48
1.73

Tables:   1

The End!