Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000279.1 Hibiscus syriacus cultivar Beakdansim tig00000518_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85373

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3972--4009
14
2.7
14
84
11
51
21
10
28
39
1.86
6987--7011
12
2.1
12
100
0
50
20
16
24
40
1.91
17482--17550
27
2.6
27
97
0
129
30
5
34
28
1.81
25608--25654
23
2.1
21
88
7
67
55
14
8
21
1.66
26635--26677
21
2.0
21
100
0
86
39
0
9
51
1.34
39323--39370
23
2.1
23
92
0
78
37
33
2
27
1.69
43748--43864
30
3.9
31
80
10
120
58
11
13
17
1.64
45068--45113
3
15.7
3
95
4
85
65
0
0
34
0.93
46625--46711
24
3.7
24
82
3
113
36
20
16
26
1.93
50020--50066
22
2.1
22
96
0
85
23
23
29
23
1.99
50779--50856
24
3.3
23
82
5
84
35
16
17
29
1.93
51668--51703
16
2.2
17
95
5
65
22
30
30
16
1.96
52017--52055
20
1.9
21
89
5
62
43
10
25
20
1.83
53758--53842
24
3.6
24
91
3
136
34
21
21
23
1.97
60308--60392
43
2.0
43
90
0
134
38
10
22
28
1.87
62048--62085
19
2.0
20
84
5
51
52
0
7
39
1.31
70871--70933
33
1.9
32
81
15
76
63
11
0
25
1.27
76316--76501
73
2.5
75
86
4
245
59
12
1
26
1.43
80771--80810
19
2.1
19
85
4
53
37
7
15
40
1.75
81642--81830
31
6.1
31
88
1
272
34
20
16
28
1.95
81911--82011
33
3.1
33
92
1
168
30
17
9
41
1.82
82132--82156
10
2.5
10
100
0
50
68
12
0
20
1.21

Tables:   1

The End!