Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002803.1 Hibiscus syriacus cultivar Beakdansim tig00005768_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61515

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--701
98
2.1
103
90
8
335
46
2
6
44
1.43
504--704
97
2.0
93
87
11
262
46
2
5
44
1.43
3315--3350
10
3.6
10
84
0
54
19
11
11
58
1.62
3353--3404
23
2.2
24
89
3
79
9
9
19
61
1.54
4120--4152
8
4.1
8
100
0
66
0
36
0
63
0.95
17607--17653
24
2.0
24
83
8
60
55
12
2
29
1.49
22976--23050
23
3.4
23
70
10
84
28
24
28
20
1.99
23000--23070
20
3.4
20
70
11
70
26
26
26
19
1.99
22977--23073
43
2.3
43
100
0
194
27
25
27
18
1.98
23805--24022
103
2.1
103
93
1
366
26
12
23
37
1.90
24062--24106
23
2.0
23
100
0
90
22
22
26
28
1.99
35017--35046
15
2.0
15
93
0
51
3
13
56
26
1.52
35961--36024
30
2.2
30
86
10
89
28
25
6
40
1.79
51799--52971
180
6.6
180
84
7
1492
44
13
15
27
1.83
51856--52907
340
3.0
341
89
6
1646
44
13
15
27
1.83
53363--53428
19
3.6
18
83
8
80
46
0
15
37
1.46
54677--54736
24
2.6
24
76
5
70
38
0
8
53
1.31
54967--55017
9
5.7
9
78
0
57
37
5
50
5
1.51
54966--55017
18
2.9
18
88
0
77
38
5
50
5
1.51
54967--55025
27
2.2
27
84
0
73
35
5
50
8
1.55
60473--60504
13
2.5
13
95
5
57
46
18
18
15
1.84

Tables:   1

The End!