Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002806.1 Hibiscus syriacus cultivar Beakdansim tig00005775_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55205

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1035--1086
21
2.3
22
83
9
61
51
19
11
17
1.75
1848--2020
31
5.5
31
88
5
244
31
21
17
28
1.97
2975--3031
23
2.5
23
88
2
89
29
24
22
22
1.99
8205--8271
31
2.4
26
78
21
89
31
22
29
16
1.96
12695--12769
38
2.0
37
84
5
98
48
4
1
46
1.29
19180--19218
20
2.0
20
85
10
53
43
25
10
20
1.83
26571--26676
51
2.1
51
92
0
176
28
9
19
42
1.82
26780--26817
2
19.0
2
100
0
76
50
0
0
50
1.00
28060--28184
43
2.9
43
97
0
241
52
14
14
19
1.75
28062--28178
25
5.2
24
62
26
69
51
14
14
19
1.76
29967--30026
21
2.8
21
82
2
66
46
0
0
53
1.00
30195--30231
20
2.0
20
84
10
51
29
0
5
64
1.15
31583--31843
129
2.0
130
93
1
454
45
11
6
36
1.68
31583--31849
128
2.1
129
92
2
439
45
11
6
35
1.68
32273--32536
38
7.2
37
73
15
115
43
4
7
43
1.53
32443--32511
33
2.1
32
86
7
95
44
5
5
43
1.52
32458--32496
20
1.9
21
84
5
53
46
7
5
41
1.55
32616--32654
18
2.2
18
86
9
53
23
15
0
61
1.33
34434--34484
18
2.8
18
77
16
52
37
13
5
43
1.69
34699--34777
31
2.5
31
95
0
140
41
21
18
17
1.90

Tables:   1

The End!