Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000281.1 Hibiscus syriacus cultivar Beakdansim tig00000520_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69660

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6426--6479
15
3.6
15
76
16
58
75
1
16
5
1.07
6422--6479
30
1.9
31
86
10
84
74
1
17
6
1.12
8011--8425
113
3.8
105
87
7
534
37
13
19
29
1.90
8676--8723
23
2.1
23
84
0
60
29
2
0
68
1.01
9953--10030
28
2.9
27
79
9
70
32
2
3
61
1.27
11646--11707
22
2.9
22
83
7
83
22
22
17
37
1.94
12448--12556
36
3.0
36
91
0
164
29
20
15
34
1.93
19575--19609
16
2.2
16
89
0
52
62
0
0
37
0.95
22169--22215
18
2.6
18
86
0
67
27
21
19
31
1.97
24614--24658
18
2.6
17
86
6
56
26
0
2
71
0.98
34004--34657
114
5.8
114
92
1
989
30
16
21
31
1.95
36884--36938
22
2.5
22
81
0
65
36
14
12
36
1.84
37375--38008
113
5.7
113
92
3
968
37
16
19
27
1.93
38442--38486
18
2.6
17
86
6
56
26
0
2
71
0.98
38539--38578
17
2.4
17
86
0
53
30
42
12
15
1.83
39908--39942
18
1.9
19
88
11
56
25
2
0
71
1.00
42557--42581
6
4.2
6
100
0
50
20
16
64
0
1.30
42788--42822
12
2.9
12
95
0
61
28
51
11
8
1.67
44228--44272
17
2.6
18
77
19
51
57
0
4
37
1.19
55199--55227
7
4.1
7
100
0
58
0
13
41
44
1.44
56305--56370
14
4.7
14
76
14
73
59
0
0
40
0.98
56306--56392
21
4.2
21
97
1
158
59
0
0
40
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61078--61656
291
2.0
288
96
2
1072
45
8
16
29
1.77
62347--62399
24
2.2
24
79
0
61
58
13
5
22
1.56
63835--63883
21
2.3
21
92
0
80
32
0
20
46
1.51

Tables:   1

The End!