Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002813.1 Hibiscus syriacus cultivar Beakdansim tig00005790_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65814

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10801--10902
47
2.2
44
83
8
116
33
19
14
32
1.92
21057--21157
49
2.1
49
100
0
202
39
11
10
37
1.77
21166--21222
20
2.6
22
89
10
82
36
24
14
24
1.92
21265--21326
23
2.7
23
87
0
79
37
12
19
30
1.89
25119--25224
32
3.3
32
90
1
160
30
24
13
32
1.93
31770--31819
21
2.4
21
93
0
82
28
20
14
38
1.91
31872--31911
21
1.9
21
94
0
71
30
20
15
35
1.93
31898--31973
20
3.7
20
84
7
82
36
15
7
39
1.77
32237--32280
23
1.9
23
90
0
70
47
29
0
22
1.51
41398--41440
13
3.2
13
86
3
50
79
4
16
0
0.90
41398--41440
14
3.1
14
87
9
54
79
4
16
0
0.90
52572--52604
16
2.1
16
94
0
57
39
21
0
39
1.53
54517--54568
22
2.3
23
77
9
54
48
3
1
46
1.31

Tables:   1

The End!