Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000282.1 Hibiscus syriacus cultivar Beakdansim tig00000521_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70070

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
824--1002
74
2.4
75
82
2
209
51
16
4
26
1.63
3837--3871
16
2.2
16
90
10
54
42
22
8
25
1.82
5930--5979
22
2.3
22
96
3
93
44
18
16
22
1.87
19320--19359
2
20.0
2
90
10
64
47
0
2
50
1.14
19649--19709
21
2.9
21
76
9
61
29
22
21
26
1.99
19690--19771
42
2.0
42
87
0
119
28
17
19
35
1.94
20182--20207
13
2.0
13
100
0
52
30
0
15
53
1.42
20252--20290
20
2.0
20
94
0
69
17
0
12
69
1.19
20239--20270
13
2.5
13
94
0
55
21
0
9
68
1.17
20800--20847
21
2.3
21
92
0
87
56
4
25
14
1.56
21996--22331
170
2.0
170
81
2
397
32
15
19
33
1.93
22660--22874
102
2.1
102
83
5
265
33
24
13
28
1.93
24994--25055
15
4.1
15
74
11
56
24
1
12
61
1.41
25283--25333
20
2.5
20
78
6
59
19
1
25
52
1.56
27146--27354
74
2.8
75
83
6
244
23
31
23
21
1.98
35688--35896
75
2.8
75
86
4
260
23
31
23
21
1.98
40359--40389
16
1.9
16
93
0
53
61
3
0
35
1.12
43168--43213
23
2.0
23
86
4
65
41
17
15
26
1.88
45170--45209
20
2.0
20
85
0
53
32
37
17
12
1.87
45455--45488
13
2.7
13
90
4
52
35
0
14
50
1.44
48784--48834
3
17.7
3
78
15
54
35
0
0
64
0.94
48782--48808
14
1.9
14
100
0
54
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48784--48834
14
3.6
14
79
12
50
35
0
0
64
0.94
50160--50221
31
2.1
32
85
11
87
33
0
3
62
1.11
50317--50550
129
1.9
127
81
6
287
39
7
7
46
1.59
61240--61284
19
2.4
19
96
0
81
42
20
15
22
1.89
61755--61801
15
3.0
15
76
17
51
74
0
19
6
1.03
63352--63781
113
3.9
108
89
5
591
37
13
19
29
1.90
65302--65360
29
2.1
29
84
15
79
35
0
1
62
1.05
66968--67029
22
2.9
22
83
7
83
22
22
17
37
1.94
67764--67872
36
3.0
36
91
0
164
29
20
15
34
1.93

Tables:   1

The End!