Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002821.1 Hibiscus syriacus cultivar Beakdansim tig00005803_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91636

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2596--2630
17
2.0
18
94
5
63
22
17
34
25
1.96
2625--2656
13
2.5
13
100
0
64
31
21
31
15
1.95
2655--2689
18
1.9
18
94
0
61
14
8
51
25
1.70
6319--6432
58
1.9
59
96
1
212
32
26
12
28
1.92
7546--7574
10
2.7
11
94
5
51
31
10
0
58
1.31
10895--10921
13
2.1
13
100
0
54
22
40
0
37
1.54
16480--16598
32
3.8
31
76
12
118
33
14
18
33
1.91
16460--16625
63
2.7
63
93
0
280
33
15
18
32
1.92
16460--16649
31
6.1
31
76
9
179
32
15
20
32
1.94
21137--21254
32
3.8
32
78
7
143
33
16
18
32
1.93
21117--21282
63
2.7
63
94
0
289
33
16
18
31
1.93
21117--21306
31
6.1
31
76
7
186
32
16
20
31
1.95
21294--21365
30
2.4
30
92
0
117
23
20
25
30
1.99
29222--29259
20
1.9
20
88
0
58
44
26
5
23
1.74
29688--29728
22
1.9
21
85
5
55
34
0
36
29
1.58
39592--39634
19
2.3
19
96
4
79
27
27
16
27
1.97
51760--51811
20
2.5
20
93
3
86
46
1
15
36
1.57
64336--64439
45
2.3
45
86
1
147
34
10
24
30
1.89
72421--72459
19
2.1
19
100
0
78
30
28
5
35
1.79
74173--74316
44
3.2
44
86
3
182
34
9
21
34
1.85
83693--83759
23
2.9
24
75
8
75
35
28
22
13
1.92
83666--83759
46
2.0
46
87
0
134
37
27
20
14
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86250--86299
20
2.5
20
83
0
64
20
26
26
28
1.99
90781--91023
103
2.3
109
89
5
372
36
15
11
36
1.84
90782--91023
55
4.5
53
85
10
334
36
15
11
36
1.84

Tables:   1

The End!