Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002823.1 Hibiscus syriacus cultivar Beakdansim tig00005805_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91473

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6376--6476
42
2.4
41
81
3
121
25
22
22
28
1.99
6593--6665
20
3.5
20
68
14
58
23
21
23
31
1.98
6594--6685
42
2.2
42
92
0
148
26
20
21
31
1.98
6649--6865
80
2.7
80
89
2
328
30
16
21
31
1.95
7279--7532
53
4.8
53
82
3
255
29
19
25
24
1.98
7279--7522
107
2.3
103
80
4
247
29
18
26
25
1.98
12780--14273
154
9.8
153
91
3
2276
41
11
15
30
1.83
22694--22734
19
2.2
19
86
8
57
0
24
7
68
1.15
22659--22731
17
4.5
17
71
10
62
0
23
8
68
1.16
23142--23175
15
2.4
15
90
9
54
38
0
0
61
0.96
23174--23232
3
19.7
3
100
0
118
66
0
0
33
0.92
23458--23887
117
3.7
116
88
3
573
29
19
12
38
1.88
23861--24039
94
1.9
93
87
2
259
29
17
17
35
1.93
23941--24151
113
1.9
113
96
0
395
29
18
14
37
1.91
23743--24209
206
2.2
210
86
4
633
29
18
14
37
1.91
24952--25499
82
6.7
82
94
2
942
36
23
12
26
1.91
26262--26307
19
2.6
18
86
10
60
50
13
6
30
1.66
38019--38060
19
2.2
20
83
12
52
57
2
2
38
1.25
38967--39007
19
2.2
19
86
8
57
0
24
7
68
1.15
39422--39462
14
2.9
15
92
7
68
39
0
0
60
0.96
39458--39525
3
22.7
3
93
0
118
66
0
1
32
1.01
41186--41244
22
2.7
22
91
0
91
30
18
13
37
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49624--49807
92
2.0
92
100
0
368
30
15
19
34
1.93
50055--50086
13
2.5
13
94
0
55
25
21
25
28
1.99
50065--50362
85
3.5
85
93
2
485
29
21
17
31
1.96
50419--50453
2
17.5
2
100
0
70
48
0
0
51
1.00
61873--61918
22
2.1
22
84
8
58
58
0
4
36
1.18
62009--62055
16
2.8
17
87
6
60
36
6
23
34
1.80
65759--65874
33
3.3
35
81
10
123
40
33
11
14
1.82
76832--76883
19
2.7
19
79
5
61
40
0
0
59
0.97
76967--77017
26
2.0
26
84
7
68
43
0
1
54
1.11
77077--77122
19
2.4
19
89
7
67
47
2
0
50
1.13
77403--77451
15
3.3
15
74
5
55
38
10
6
44
1.63
77396--77503
30
3.6
30
82
1
119
37
11
10
41
1.74
83017--83083
34
1.9
34
82
14
84
46
19
13
20
1.83

Tables:   1

The End!