Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000283.1 Hibiscus syriacus cultivar Beakdansim tig00000524_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69728

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1755--1793
19
2.1
18
90
4
60
58
0
0
41
0.98
1986--2030
2
23.0
2
90
4
74
51
0
2
46
1.13
7723--7775
24
2.2
24
79
0
61
58
13
5
22
1.56
9212--9260
21
2.3
21
92
0
80
32
0
20
46
1.51
9282--9310
2
14.5
2
100
0
58
48
0
0
51
1.00
24914--24984
22
3.2
21
72
14
70
43
12
7
36
1.70
24913--24995
24
3.5
24
74
12
91
40
13
8
37
1.75
24914--25016
46
2.2
46
94
0
179
40
14
7
36
1.75
24940--25016
22
3.4
22
76
13
93
38
16
6
37
1.75
29718--29746
14
2.0
15
93
6
51
44
0
0
55
0.99
32341--32378
20
1.9
20
88
0
58
21
10
34
34
1.87
32646--32809
83
2.0
83
97
0
310
30
15
17
36
1.91
36331--36461
58
2.3
58
93
0
217
36
9
12
41
1.76
36364--36646
99
2.8
97
79
9
227
37
8
9
44
1.68
36649--36786
38
3.6
39
79
9
117
42
7
9
39
1.66
36696--36825
39
3.4
39
79
2
136
43
6
9
41
1.61
36865--36976
38
2.9
38
80
5
118
36
4
11
47
1.60
36730--37018
135
2.1
135
82
3
330
39
5
11
43
1.65
39958--40042
44
1.9
44
92
0
143
23
12
5
57
1.57
45732--45770
2
19.5
2
100
0
78
51
0
0
48
1.00
51498--51541
15
3.1
15
81
15
58
52
0
0
47
1.00

Tables:   1

The End!