Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000284.1 Hibiscus syriacus cultivar Beakdansim tig00000526_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75887

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6275--6318
21
2.1
21
100
0
88
45
4
25
25
1.72
6603--6636
14
2.4
14
90
0
50
32
29
20
17
1.96
11379--11470
47
2.0
47
91
0
148
26
17
22
33
1.96
26020--26054
18
1.9
18
94
0
61
40
11
8
40
1.72
30212--30969
66
11.5
66
95
0
1331
32
17
20
29
1.95
32172--32213
12
3.4
12
78
15
50
11
14
0
73
1.09
32139--32213
22
3.2
23
83
12
73
8
17
0
74
1.04
32150--32215
34
2.0
33
82
14
82
10
18
0
71
1.14
35718--35788
25
2.8
25
78
20
67
67
1
8
22
1.25
35724--35777
4
13.8
4
79
14
51
72
0
5
22
1.05
45161--45221
26
2.3
26
82
0
77
39
8
11
40
1.71
45389--45469
39
2.1
38
88
2
117
17
30
22
29
1.96
50550--50578
15
1.9
15
100
0
58
55
6
0
37
1.27
50548--50591
15
2.9
15
86
0
52
59
6
2
31
1.36
51748--51776
2
15.0
2
92
7
51
48
0
0
51
1.00
52892--52935
21
2.1
21
86
0
61
29
0
4
65
1.12
52982--53023
2
21.0
2
100
0
84
50
0
0
50
1.00
53160--53201
8
5.2
8
77
11
50
16
0
0
83
0.65
53862--53922
31
2.0
31
87
6
88
37
13
8
40
1.74
55393--55443
18
2.7
18
77
17
50
37
3
0
58
1.16
59846--59984
30
4.7
30
80
8
115
53
7
17
20
1.68
59847--59962
60
2.0
58
82
3
142
53
7
18
20
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61467--61500
17
2.0
17
100
0
68
41
0
0
58
0.98
61787--61892
40
2.5
42
79
13
121
22
19
33
23
1.97
61802--62038
129
1.8
131
82
3
309
24
18
31
25
1.98
62113--62204
35
2.6
35
94
3
159
33
13
20
32
1.91
62178--62322
63
2.3
63
81
3
157
42
12
15
29
1.84
63519--63607
13
7.2
12
72
17
69
1
14
8
75
1.10
64983--65039
14
4.0
14
75
8
53
54
0
1
43
1.10
68607--68725
62
1.9
61
91
1
193
32
28
11
26
1.92
69478--69565
32
2.8
30
80
12
106
60
5
2
31
1.33
72864--72993
3
44.7
3
76
13
121
66
0
0
33
0.98
73353--73922
118
4.7
118
84
8
715
26
19
15
38
1.91
74113--74170
22
2.6
22
88
0
80
32
15
10
41
1.81
74518--74565
20
2.4
20
92
0
78
27
25
12
35
1.92
75184--75216
12
2.5
14
85
14
52
15
9
0
75
1.03
75188--75224
19
1.9
20
88
5
58
13
8
0
78
0.96

Tables:   1

The End!