Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000286.1 Hibiscus syriacus cultivar Beakdansim tig00000528_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57966

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7035--7108
9
8.7
9
78
11
66
83
0
13
2
0.74
7035--7108
12
6.2
12
76
3
78
83
0
13
2
0.74
7032--7109
8
9.4
8
76
13
77
82
0
15
2
0.79
8215--8673
114
4.0
114
85
4
588
28
23
16
31
1.96
8593--8715
47
2.6
48
89
1
176
24
27
15
32
1.95
14745--15407
54
12.3
54
85
0
790
29
17
20
32
1.96
23242--23276
13
2.6
13
90
4
52
82
0
11
5
0.82
24409--24798
139
2.8
139
88
1
539
35
16
21
26
1.94
24679--24914
119
2.0
119
88
0
355
37
15
22
25
1.93
24988--25090
43
2.4
43
81
3
118
31
12
22
33
1.91
27274--27313
19
2.1
19
95
0
71
22
15
17
45
1.85
30577--30619
20
2.2
20
83
8
52
65
6
2
25
1.30
43771--43817
19
2.5
19
96
0
85
25
38
21
14
1.92
48205--48327
64
1.9
65
85
8
171
32
19
16
31
1.94
48550--48574
10
2.5
10
100
0
50
72
20
8
0
1.10
50967--50999
15
2.2
15
94
0
57
9
69
15
6
1.34
52732--52781
15
3.3
15
85
0
73
10
62
18
10
1.54

Tables:   1

The End!