Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002864.1 Hibiscus syriacus cultivar Beakdansim tig00005907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59338

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2669--2715
22
2.2
20
85
10
67
14
12
19
53
1.73
2702--2844
32
4.5
32
76
3
137
20
4
16
58
1.55
5730--6119
139
2.8
137
80
6
414
43
13
13
29
1.82
6127--6179
25
2.1
26
89
3
81
50
24
9
15
1.73
9491--9536
22
2.1
22
87
0
65
34
19
21
23
1.96
10302--10341
20
2.0
20
90
0
62
22
22
27
27
1.99
10364--10404
21
2.0
21
90
0
64
24
21
26
26
2.00
10436--10486
19
2.7
19
90
0
75
35
17
9
37
1.83
10803--10986
44
4.2
44
72
8
158
34
14
22
28
1.93
18228--18265
19
2.0
19
94
0
67
13
26
34
26
1.93
18630--18664
17
2.1
17
100
0
70
28
37
0
34
1.58
20380--20404
13
1.9
13
100
0
50
44
0
16
40
1.47
20899--20970
23
3.2
23
94
2
119
29
22
26
22
1.99
25031--25167
5
26.2
5
72
17
59
3
18
2
75
1.06
25006--25138
46
2.9
45
78
7
126
3
19
1
75
1.04
25046--25134
31
3.1
28
76
16
85
3
14
2
79
0.95
25025--25159
6
21.8
6
72
15
80
2
19
2
75
1.04
25046--25136
14
6.7
13
78
14
71
3
15
2
79
0.97
25037--25123
44
2.1
42
85
12
117
1
19
2
77
0.95
25047--25168
32
3.9
30
78
18
92
4
16
2
77
1.04
25006--25123
46
2.6
45
83
11
136
2
20
1
75
1.01
31595--31634
21
1.9
21
89
0
62
30
7
7
55
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33580--33619
20
2.0
20
95
0
71
12
25
37
25
1.91
36196--36240
2
22.5
2
95
0
81
48
0
2
48
1.13
37754--37788
18
1.9
18
100
0
70
22
28
8
40
1.84
41112--41138
11
2.5
11
100
0
54
48
44
0
7
1.31
41803--42068
40
6.6
40
72
9
182
32
16
15
35
1.90
41823--42061
83
2.9
82
78
7
229
32
16
15
35
1.90
43486--43529
14
2.8
16
74
19
56
2
13
29
54
1.51
51116--51150
9
3.9
9
88
0
52
25
0
0
74
0.82
51453--51489
19
2.0
20
84
10
51
54
0
0
45
1.00
51722--51750
12
2.3
13
94
5
51
0
10
6
82
0.83
52252--52313
21
3.0
21
76
6
72
40
1
0
58
1.08
53776--53917
64
2.2
64
85
7
182
28
16
23
31
1.96
53885--53935
18
2.8
18
93
0
84
25
19
31
23
1.98
56520--56600
23
3.6
23
74
15
89
25
22
25
25
2.00
56981--57015
15
2.3
15
100
0
70
20
25
25
28
1.99

Tables:   1

The End!