Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002873.1 Hibiscus syriacus cultivar Beakdansim tig00005924_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76492

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
949--1010
23
2.8
22
82
2
79
22
20
30
25
1.98
4779--4818
21
1.9
21
85
10
55
35
7
2
55
1.42
17042--17108
16
4.2
16
74
0
62
53
10
13
22
1.69
17042--17108
32
2.1
32
85
0
89
53
10
13
22
1.69
17068--17138
32
2.3
31
85
2
88
53
11
14
21
1.71
28496--28562
16
4.2
16
74
0
62
53
10
13
22
1.69
28496--28562
32
2.1
32
85
0
89
53
10
13
22
1.69
28522--28593
32
2.2
32
87
0
99
54
11
13
20
1.70
28500--28598
16
6.2
17
72
9
57
52
14
14
19
1.74
40484--40518
16
2.1
17
94
5
63
34
25
8
31
1.86
45264--45318
2
27.5
2
88
0
83
56
0
0
43
0.99
47384--47431
22
2.1
23
88
3
71
31
4
6
58
1.42
47567--47593
2
13.5
2
100
0
54
48
0
0
51
1.00
49787--49822
2
18.0
2
100
0
72
50
0
0
50
1.00
50090--50171
30
2.8
30
86
1
103
32
30
20
15
1.94
51100--51157
20
2.6
22
84
10
75
27
22
18
31
1.97
51145--51285
64
2.2
63
80
9
153
25
22
18
33
1.97
52176--52211
2
17.5
2
94
5
63
47
2
0
50
1.15
52492--52531
20
2.1
19
90
4
62
20
17
0
62
1.33
55603--55660
20
2.6
22
84
10
75
27
22
18
31
1.97
55648--55788
64
2.2
63
81
7
160
25
22
18
33
1.97
58475--58502
14
2.0
14
100
0
56
28
7
21
42
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59877--59923
2
23.5
2
100
0
94
48
0
0
51
1.00
68744--68821
38
2.1
38
97
0
147
19
19
16
44
1.86
73963--74004
21
2.0
21
100
0
84
47
28
9
14
1.75

Tables:   1

The End!