Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002876.1 Hibiscus syriacus cultivar Beakdansim tig00005930_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50648

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1039--1082
19
2.3
20
81
14
58
31
2
2
63
1.19
3957--3994
12
3.0
13
92
7
69
21
15
7
55
1.66
5218--5255
2
19.0
2
100
0
76
50
0
0
50
1.00
6090--6244
16
9.7
16
90
0
247
44
32
18
3
1.68
6710--6771
20
3.1
20
76
0
61
45
17
16
20
1.86
7207--7256
18
2.8
18
96
0
91
14
16
12
58
1.64
9035--9060
12
2.2
12
100
0
52
38
7
11
42
1.70
9187--9226
15
2.7
15
100
0
80
37
5
12
45
1.64
16268--16309
21
2.0
21
95
0
75
14
30
28
26
1.95
17134--17715
59
10.0
59
89
2
863
28
20
12
38
1.90
18150--18213
22
3.0
23
80
13
75
25
32
12
29
1.92
18109--18288
95
1.9
95
85
5
240
27
24
16
32
1.96
19577--19618
2
21.0
2
90
9
68
50
0
2
47
1.14
20874--20917
21
2.1
21
91
0
70
59
0
2
38
1.10
25566--25607
18
2.3
18
100
0
84
40
26
11
21
1.88
28080--28110
4
7.8
4
92
0
53
70
0
3
25
1.02

Tables:   1

The End!