Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002877.1 Hibiscus syriacus cultivar Beakdansim tig00005931_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  291049

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212657--212822
42
4.0
42
82
3
192
29
15
21
33
1.94
212681--212824
41
3.5
41
81
6
148
32
16
19
31
1.94
213650--213737
44
2.0
44
97
0
167
35
34
14
15
1.89
216431--216459
15
1.9
15
100
0
58
55
10
27
6
1.59
216895--216944
21
2.4
21
100
0
100
26
26
26
22
2.00
225584--225661
10
8.2
10
73
11
74
46
16
3
33
1.65
225596--225677
20
3.7
21
83
12
85
46
17
2
34
1.61
225591--225651
26
2.3
26
100
0
122
47
14
3
34
1.61
228743--228830
3
29.0
3
86
2
59
2
44
0
53
1.13
228741--228790
21
2.4
21
82
0
73
2
44
0
54
1.11
228764--228825
15
4.1
15
95
0
115
0
48
0
51
1.00
228755--228822
30
2.3
30
97
0
127
0
50
0
50
1.00
228750--228825
18
4.4
18
85
9
104
0
47
0
52
1.00
229036--229081
22
2.1
22
88
8
67
32
17
43
6
1.75
233813--233881
30
2.3
30
85
5
86
28
20
21
28
1.98
233826--233910
30
2.8
30
83
3
100
28
20
23
28
1.99
240528--240579
14
3.7
14
84
0
68
17
11
11
59
1.60
240781--240822
17
2.5
17
96
0
75
19
9
16
54
1.69
251394--251445
25
2.1
25
92
0
86
28
11
11
48
1.74
252490--252644
59
2.6
59
79
5
168
43
5
16
33
1.72
253097--253137
20
2.0
22
85
9
59
63
2
2
31
1.20
260137--260203
16
4.2
16
74
0
62
53
10
13
22
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
260137--260203
32
2.1
32
85
0
89
53
10
13
22
1.69
261356--261395
20
2.0
20
100
0
80
40
40
5
15
1.68
262483--262532
24
2.1
24
85
7
66
60
16
2
22
1.46
269305--269348
21
2.1
21
86
0
61
22
18
29
29
1.97
271629--271678
24
2.1
24
85
7
66
60
16
2
22
1.46
274482--274523
19
2.2
19
91
0
66
14
30
30
23
1.94
274505--274566
23
2.8
22
82
2
79
22
20
30
25
1.98
278377--278416
21
1.9
21
85
10
55
35
7
2
55
1.42
283896--283931
18
1.9
19
94
5
65
33
11
11
44
1.75
289779--289932
77
2.0
78
86
6
215
43
5
11
38
1.65
290549--290615
16
4.2
16
74
0
62
53
10
13
22
1.69
290549--290615
32
2.1
32
85
0
89
53
10
13
22
1.69
290575--290646
32
2.2
32
87
0
99
54
11
13
20
1.70
290553--290651
16
6.2
17
72
9
57
52
14
14
19
1.74

Tables:   1   2

The End!