Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002885.1 Hibiscus syriacus cultivar Beakdansim tig00005967_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60303

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5235--5400
85
2.0
85
90
2
262
29
21
17
31
1.96
5418--5450
2
16.5
2
100
0
66
48
0
0
51
1.00
9979--11280
650
2.0
650
94
1
2304
29
16
16
37
1.91
12204--12257
22
2.4
22
84
3
72
38
27
20
12
1.89
15408--15442
15
2.2
16
90
5
54
25
2
2
68
1.17
18870--18916
18
2.6
18
100
0
94
38
19
4
38
1.71
23356--23403
21
2.3
21
96
0
87
27
12
20
39
1.89
25012--25162
2
75.5
2
97
0
284
0
0
49
49
1.10
25229--25253
2
12.5
2
100
0
50
52
0
0
48
1.00
30224--30277
2
27.5
2
96
3
101
50
0
0
50
1.00
30214--30281
8
9.6
7
90
9
63
50
0
0
50
1.00
34243--34359
60
2.0
60
83
6
148
45
4
17
32
1.68
48441--48481
20
2.2
19
87
12
59
31
2
2
63
1.20
48543--48571
11
2.5
12
94
5
51
79
3
0
17
0.87
49009--49226
107
2.0
107
94
0
382
46
8
7
37
1.63
49116--49635
201
2.7
189
87
6
735
46
8
5
39
1.57
48808--49429
308
2.0
308
96
0
1154
46
8
6
37
1.60
54549--54595
23
2.0
23
83
4
58
70
0
2
27
0.99
55696--55750
21
2.6
21
80
11
58
67
0
0
32
0.91
57421--57506
43
2.0
43
86
4
120
32
24
11
31
1.91

Tables:   1

The End!